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UBC Okanagan, Quantitative Ecology - QIIME 2 Forum Situated in the heart of the Okanagan Valley, one of the most scenic regions in Canada, it offers an intimate learning environment and excellent opportunities for regional, national, and international scholarly activities Biology, at UBC's Okanagan campus, is housed in the vibrant Irving K Barber School of Arts and Sciences
PhD Opportunity - Soil Microbial Ecology - q2-jobs - QIIME 2 Forum UTSA is a public research university and a Hispanic-Serving Institution located in scenic San Antonio, Texas The main campus, where the graduate position will be housed, enrolls ~34,000 students and has a diverse set of collaborative groups spanning ecology, microbiology, geosciences, and natural resource management
PERMANOVA results significant, but differential abundance results . . . Hello, I am performing a study about differences in microbial communities between two sample types in an Antarctic ecosystem According to PERMANOVA, there are significant differences between communities of the two sample types However, when performing differential abundance analysis (Tried ANCOM and LEFSE so far) and performing Holm p-value correction, I detect zero significantly different
how to reference the plugins used - QIIME 2 Forum I wanted to ask if anyone can help me to know how to cite the qiime plugins (permanova, shannon, observed features, evenness, faith phylogenetic tree, braycurtis, scenic plugin, taxa barplot, and picrust2) See this page for more details and an example (that covers some of the methods you mentioned):
PhD position plant insect interaction in agricultural fields in Germany The University of Kassel is a modern and growing University with round about 23 000 students The university’s wide range of expertise covers subjects in the natural, applied, cultural and social sciences At the University of Kassel, Faculty of Biology, Group Botany (Prof Dr Birgit Gemeinholzer), the following position is to be filled by 1th of April 2024 or later: Doctoral Researcher (m
Core-metrics-phylogenetic: Plugin error from Diversity returned non . . . I am currently running 2023 7 and am getting a non-zero exit status I don #39;t understand I had run core metrics on this same dataset in 2020 11 and didn #39;t have an issue qiime diversity core-metrics-phylogenetic --i-tabl hellip;
Diversity analysis with otu table and taxonomy data Hi, I am beginning to use Qiime2, and I try to do the diversity analysis The aim is to discover the relationship between the diversity and the status Now, I receive some datasets from collaborators OTU_table ( otu id and the sample identify) OTU_mapping file (OTU_id, acc, full_name, taxonomy) Sample mapping file (ids, type, etc) According to the tutorial, I first generate a biom file with