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iDEP 2. 0 - South Dakota State University iDEP makes it easy for users to choose different pathway analysis methods and databases The drawback is that it is easy to rationalize any a priori hypothesis (bias) With so many choices and knobs to turn, you can make any story you wanted to make!
iDEP. 96 - South Dakota State University All new iDEP 1 1 released in testing mode on April 25, 2023 The new version includes both software and database updates With Ensembl 107 and STRING-db 11 5, our database now has annotation for 14,000 species! If this server is busy, try our mirror site (faster) for iDEP 0 96, and iDEP 1 1
iDEP. 94 - South Dakota State University Search annotated species by common and scientific names, or NCBI taxonomy id For other species, you can still use iDEP, except enrichment analysis
African Institute for Economic Development and Planning (IDEP) IDEP is the pioneer pan-African institution established on the African continent for the building, upgrading and or updating of the technical aptitudes and proficiencies of mid-career and senior government officials in economic management and development planning
iDEP: an integrated web application for differential . . . iDEP (integrated Differential Expression and Pathway analysis) seamlessly connects 63 R Bioconductor packages, 2 web services, and comprehensive annotation and pathway databases for 220 plant and animal species The workflow can be reproduced by downloading customized R code and related pathway files
iDEP Web Application for RNA-Seq Data Analysis - PubMed We developed a user-friendly web app called iDEP (integrated differential expression and pathway analysis) to help biologists interpret read counts or other types of expression matrices derived from read mapping