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Introduction - Brainstorm Introduction Brainstorm is a collaborative, open-source application dedicated to the analysis of brain recordings: MEG, EEG, fNIRS, ECoG, depth electrodes and multiunit electrophysiology The application is free; a Matlab license is not required to use it Our objective is to share a comprehensive set of user-friendly tools with the scientific community using MEG EEG as an experimental
Tutorials - Brainstorm Tutorials These tutorial pages suppose you are comfortable with the basic concepts of MEG EEG analysis and source imaging If you're not, we encourage you to read some background literature To get a quick overview of the software interface, you can watch this introduction video Get started The easiest way to get started with Brainstorm is to read and follow carefully these introduction
Tutorials SegCAT12 - Brainstorm MRI Segmentation with CAT12 Authors: Francois Tadel CAT is a SPM12 toolbox that is fully interfaced with Brainstorm It can replace efficiently FreeSurfer for generating the cortical surface from any T1 MRI It runs on any OS in about 1 hour, instead of the typical 24hr FreeSurfer recon-all processing The surfaces are registered to the templates with the FreeSurfer spheres, and include many
Tutorials Fooof - Brainstorm Specparam Fitting Oscillations and One-Over-F (FOOOF) Authors: Luc Wilson, Jason da Silva Castanheira, Raymundo Cassani This tutorial introduces the features developed in Brainstorm to compute and view FOOOF models from a Welch’s Power Spectral Density (PSD) file Note: The FOOOF algorithm has recently been renamed by its authors to specparam
CoordinateSystems - Brainstorm In Brainstorm, MNI coordinates refer to the normalized space defined in SPM12, also referred to as IXI549 space Like the MRI coordinates above, it is in mm, and the (X, Y, Z) axes are oriented towards (right, anterior, dorsal)
Tutorials TutPac - Brainstorm Phase-amplitude coupling Authors: Soheila Samiee, Thomas Donoghue, Francois Tadel, Sylvain Baillet This tutorial introduces the concept of phase-amplitude coupling (PAC) and the metrics used in Brainstorm to estimate it These tools are illustrated first on simulated recordings In separate tutorials, we illustrate how to use them on resting-state MEG recordings
Tutorials Scouts - Brainstorm Tutorial 23: Scouts Authors: Francois Tadel, Elizabeth Bock, Raymundo Cassani, John C Mosher, Richard Leahy, Sylvain Baillet In Brainstorm jargon, a scout represents a region of interest (ROI) in the available source space It is a subset of dipoles defined on the cortex surface or the head volume This tutorial explains how to create one or several scouts, use them to represent the activity
Tutorials ImportAnatomy - Brainstorm Brainstorm orients most of its database organization and processing stream for handling anatomical information together with the MEG EEG recordings, because its primary focus was to estimate brain sources from MEG EEG, which ideally requires an accurate spatial modelling of the head and sensors
Installation - Brainstorm - University of Southern California When Brainstorm starts, it checks online if a version newer than a month-old is available To disable the automatic updates, edit the software preferences (File > Edit preferences) Restart Matlab after updating the software Manual updates (Matlab version only): Menu Update > Update Brainstorm, in the main application window