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- Reverse complement of DNA strand using Python - Stack Overflow
13 I have a DNA sequence and would like to get reverse complement of it using Python It is in one of the columns of a CSV file and I'd like to write the reverse complement to another column in the same file The tricky part is, there are a few cells with something other than A, T, G and C I was able to get reverse complement with this piece
- What is a quick way to find the reverse complement in bash
I have a DNA sequence for which I would like to quickly find the reverse complement Is there a quick way of doing this on the bash command line using only GNU tools?
- How to reverse complement a DNA strand using R - Stack Overflow
But to get the reverse complement of the sequence, i e the complementary sequence with the standard 5' to 3' orientation, you must also revert the result Example using base R: intToUtf8(rev(utf8ToInt(dna)))
- creating complement of DNA sequence and reversing it C++
creating complement of DNA sequence and reversing it C++ Asked 10 years, 1 month ago Modified 4 years, 7 months ago Viewed 10k times
- k mer - Why do we count reverse compliments when counting kmers in a . . .
When looking for repeat patterns in a DNA sequence, we can look for the pattern and its reverse compliment with up to d mismatches However, why do we look for reverse compliments if we're analyzing a single DNA strand?
- python - Reverse complement DNA - Stack Overflow
Reverse complement DNA Asked 12 years, 1 month ago Modified 9 years, 4 months ago Viewed 13k times
- How to reverse complement the DNA sequences for given inverse reverse . . .
I need to reverse complement the sequences, only if it in reverse order inverse order Which ever sequences are not in reverse order (Properly order sequences), only to be extracted as its not to be reverse complemented
- r - Complement a DNA sequence - Stack Overflow
rev(comp(seq)) # gives the reverse complement Biostrings has a much smaller memory profile, but seqinr is nice also because you can choose the case of the bases (including mixed) and change them to anything you want, for example if you want a mix of T and U in the same sequence
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