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- IGV: Integrative Genomics Viewer
The IGV Team is based at UC San Diego and the Broad Institute of MIT and Harvard The best way to reach us is by posting to the igv-help forum or by creating issues in our GitHub repositories
- Download IGV - IGV Desktop Application
igv js - a JavaScript component that can be embedded in web pages (for developers) Helga Thorvaldsdóttir, James T Robinson, Jill P Mesirov Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration Briefings in Bioinformatics 14, 178-192 (2013)
- IGV Desktop Application
This site is focused on the IGV desktop application See https: igv org for links to all forms of IGV
- IGV-Web App
IGV-Web is a web application for exploring genomic datasets Data can be loaded directly from a user’s local file system, or via URL from web servers and cloud providers
- User Guide - IGV-Web App
IGV-Web has a number of options for saving the state of your IGV session: you can save a file in IGV session format, bookmark the page in your browser, or create a web link URL that you can share with others
- Download IGV - IGV Desktop Application
Apple's Rosetta software is required to run the IGV MacOS App that includes Java If you run IGV with your own Java installation, Rosetta may not be required if your version of Java runs natively on M1
- BLAT - IGV Desktop Application
By default, IGV uses a public BLAT web service hosted at UCSC, and BLAT support is limited to reference genomes that are available at UCSC However, the BLAT utility used by IGV can be changed to another BLAT web service or a locally executable command line program that returns BLAT-like results
- 2. 19. x - IGV Desktop Application
See https: igv org for links to all forms of IGV The source code repository for the IGV desktop application is hosted on GitHub at https: github com igvteam igv
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