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- Expasy - ProtParam
ProtParam [Documentation Reference] is a tool which allows the computation of various physical and chemical parameters for a given protein stored in UniProtKB or for a user entered protein sequence The computed parameters include the molecular weight, theoretical pI, amino acid composition, atomic composition, extinction coefficient, estimated half-life, instability index, aliphatic index
- Expasy - ProtParam documentation
The parameters computed by ProtParam include the molecular weight, theoretical pI, amino acid composition, atomic composition, extinction coefficient, estimated half-life, instability index, aliphatic index and grand average of hydropathicity (GRAVY) Molecular weight and theoretical pI are calculated as in Compute pI Mw
- ProtParam References - Expasy
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- Expasy - Translate tool
Translate is a tool which allows the translation of a nucleotide (DNA RNA) sequence to a protein sequence
- Expasy - ProtScale
ProtScale allows you to compute and represent the profile produced by any amino acid scale on a selected protein An amino acid scale is defined by a numerical value assigned to each type of amino acid The most frequently used scales are the hydrophobicity or hydrophilicity scales and the secondary structure conformational parameters scales, but many other scales exist which are based on
- Expasy - ProtParam
ProtParam User-provided sequence: 1 0 2 0 3 0 4 0 5 0 6 0 MKVVPEKNAV RILWGRERGA RAMGAQRLLQ ELVEDKTRWM KWEGKRVELP DSPRSTFLLA 7 0 8 0 9 0 10 0 11 0 12 0 FSPDRTLLAS THVNHNIYIT EVKTGKCVHS LIGHRRTPWC VTFHPTISGL IASGCLDGEV 13 0 14 0 15 0 16 0 17 0 18 0 RIWDLHGGSE SWFTDSNNAI ASLAFHPTAQ LLLIATANEI HFWDWSRREP FAVVKTASEM
- Expasy - Compute pI Mw tool
Compute pI Mw is a tool which allows the computation of the theoretical isoelectric point (pI) and molecular weight (Mw) of a list of UniProtKB entries or user entered sequences
- Contact us - Expasy
Contact the Expasy team for any inquiries or support regarding their bioinformatics tools and resources
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